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GeneChip Rhesus Macaque Genome Array

The rhesus macaque, Macaca mulatta, is an important model organism for human disease research.

Part # Description Unit Size Your Price(USD)
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900655
GeneChip Rhesus Macaque Genome Array
 contains 2 arrays    Please Inquire
900656
GeneChip Rhesus Macaque Genome Array
 contains 6 arrays    Please Inquire
900657
GeneChip Rhesus Macaque Genome Array
 contains 30 arrays    Please Inquire
     

The rhesus macaque, Macaca mulatta, is an important model organism for human disease research. The GeneChip® Rhesus Macaque Genome Array enables researcher to study gene expression in the rhesus animal model by simultaneously interrogating over 47,000 M. mulatta transcripts. Additionally, the Rhesus Genome Array contains several relevant viral organisms for studying host-disease immune response.

The sequence information for this array was selected from public data sources including data from the University of Nebraska, the Baylor School of Medicine - Rhesus Macaque Whole Genome Shotgun Assembly (October 1, 2004), and GenBank® STSs, ESTs, and mRNAs up to March 30, 2005. Additionally, probe sets were designed to interrogate rhesus transcripts orthologous to the 3' end of human transcripts (GeneChip® Human Genome U133 Plus 2.0 Array and RefSeq sequences up to March 2005).

Acknowledgements: Affymetrix, Inc. would like to acknowledge Dr. Rob Norgren from the University of Nebraska for his invaluable input into the design of the Rhesus Genome Array.

Instrument and Software Requirements


*GeneChip Scanner 3000 High-Resolution Update is standard on all instruments shipped starting in September 2003 with serial number series 502. Previous versions (serial number series 501) will require the 00-0110 GeneChip Scanner 3000 High-Resolution Update to be installed.

For research use only. Not for use in diagnostic procedures.

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Comparison Sheets / Array Comparisons

HG-U133 Plus 2.0 to Rhesus Good Match

HG-U133 Plus 2.0 to Rhesus Complex

HG-U133 Plus 2.0 to Rhesus No Match

HG-U133 Plus 2.0 to Rhesus Best Match

Comparison Spreadsheets User's Guide (pdf, 82 KB)

Data Sheets

Rhesus Macaque Genome Array (pdf, 91 KB)

Library Files

Rhesus Macaque Genome Array (zip, 30 MB)

Manuals

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf 5.93 MB)

3' IVT Express Kit User Manual (pdf, 1.6 MB)

Probe Set Data in MAGE-ML Format

Package Inserts

Rhesus Macaque Genome Array (pdf, 493 KB)

Protocol, Long

Gene Expression Arrays

Other

Fluidics Scripts

NetAffx Alignment Files

Rhesus Alignments To Genome, PSL Format (2 MB 11/17/06)

NetAffx Annotation Files

Rhesus Annotations, CSV format, Release 30 (9 MB 11/15/09)

Rhesus Annotations, MAGE-ML XML Format, Release 30 (41 MB 11/15/09)

Rhesus BLASTP annotations, CSV Format, Release 30 (2 KB 11/16/09)

Rhesus Orthologs/Homologs, CSV Format, Release 30 (1 KB 11/15/09)

Sequence Files

Rhesus Consensus Sequences, FASTA (10 MB 08/20/08)

Rhesus Control Sequences, FASTA (51 KB 09/17/05)

Rhesus Probe Sequences, FASTA (13 MB 08/20/08)

Rhesus Probe Sequences, Tabular (11 MB 08/20/08)

Rhesus Target Sequences, FASTA (7 MB 08/20/08)

Archived NetAffx Annotation Files

Rhesus Annotations, MAGE-ML XML, Release 20 (51 MB 06/15/07)

Rhesus Annotations, CSV, Release 20 (13 MB 05/31/07)

Rhesus Annotations, BLASTP, Release 20 (4 MB 07/14/06)

Rhesus Annotations, CSV format, Release 21 (14 MB 05/31/07)

Rhesus Annotations, MAGE-ML XML format, Release 21 (53 MB 06/15/07)

Rhesus BLASTP annotations, CSV format, Release 21 (4 MB 11/15/06)

Rhesus Annotations, CSV format, Release 22 (15 MB 05/31/07)

Rhesus Annotations, MAGE-ML XML Format, Release 22 (49 MB 06/15/07)

Rhesus BLASTP annotations, CSV Format, Release 22 (978 KB 03/09/07)

Rhesus Orthologs/Homologs, CSV Format, Release 22 (0 KB 03/09/07)

Rhesus Annotations, CSV format, Release 23 (9 MB 07/12/07)

Rhesus Annotations, MAGE-ML XML Format, Release 23 (41 MB 07/12/07)

Rhesus BLASTP annotations, CSV Format, Release 23 (825 KB 07/12/07)

Rhesus Annotations, CSV format, Release 24 (9 MB 11/06/07)

Rhesus Annotations, MAGE-ML XML Format, Release 24 (39 MB 11/06/07)

Rhesus BLASTP annotations, CSV Format, Release 24 (1 KB 11/06/07)

Rhesus Annotations, CSV format, Release 25 (9 MB 03/18/08)

Rhesus Annotations, MAGE-ML XML Format, Release 25 (40 MB 03/18/08)

Rhesus BLASTP annotations, CSV Format, Release 25 (1 KB 03/18/08)

Rhesus Annotations, CSV format, Release 26 (9 MB 07/08/08)

Rhesus Annotations, MAGE-ML XML Format, Release 26 (40 MB 07/08/08)

Rhesus Annotations, CSV format, Release 27 (9 MB 11/30/08)

Rhesus Annotations, MAGE-ML XML Format, Release 27 (42 MB 11/24/08)

Rhesus BLASTP annotations, CSV Format, Release 27 (599 KB 11/24/08)

Rhesus Annotations, CSV format, Release 28 (9 MB 03/12/09)

Rhesus Annotations, MAGE-ML XML Format, Release 28 (41 MB 03/12/09)

Rhesus BLASTP annotations, CSV Format, Release 28 (2 KB 03/04/09)

Rhesus Annotations, CSV format, Release 29 (9 MB 07/01/09)

Rhesus Annotations, MAGE-ML XML Format, Release 29 (41 MB 07/01/09)

Rhesus BLASTP annotations, CSV Format, Release 29 (2 KB 07/01/09)

Rhesus Orthologs/Homologs, CSV Format, Release 29 (1 KB 07/01/09)

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