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GeneChip Human Mapping 100K Set
GeneChip Human Mapping 100K Set
The GeneChip® Human Mapping 100K Set is part of a growing family of products for copy number analysis.
The GeneChip® Human Mapping 100K Set is part of a growing family of products for copy number analysis. It is comprised of a set of two arrays that provide the highest resolution copy number analysis using the proven, easy-to-use GeneChip® Mapping Assay. With a mean marker distance of 26 kb, the Mapping 100K Set provides the highest genomic coverage, giving researchers more power to detect changes in chromosomal copy number. The Mapping 100K Set is the only technology to provide both copy number and allele-specific information, allowing researchers to discover copy neutral changes.
100,000 SNPs
The GeneChip Mapping 100K Set has also been used for other applications, including population genetics, linkage disequilibrium analysis, and whole-genome association studies. The new GeneChip® Mapping 500K Array Set provides more power to understand the genetic differences between individuals, and is the recommended product for these applications.
Benefits of the Mapping 100K Set
- Copy number and allele-specific information from a single experiment
- Highest resolution analysis for copy number
- Visualize copy number, genotype, and expression data within the context of the genome and gene annotations
- Learn more about the Integrated Genome Browser
- Proven approach for copy number analysis
- See list of nearly 250 publications (pdf, 159 KB) on mapping assay
- Growing family of publicly available analysis solutions
- Learn more about analysis solutions for copy number
For research use only. Not for use in diagnostic procedures.
Application Notes
Microarrays in Cancer Research (pdf, 423 KB)
Data Sheets
Affymetrix Solutions for Cancer Analysis (pdf, 367 KB)
Human Mapping 100K Set (pdf, 172 KB)
Library Files
Mapping 50K Xba 240 Array (zip, 17 MB)
Mapping 50K Hind 240 Array (zip, 16 MB)
Manuals
100K Mapping Assay Manual (pdf, 1.2 MB)
Probe Set Data in MAGE-ML Format
Package Inserts
Human Mapping 50K Xba Assay kit and Human Mapping 50K Hind Assay Kit (pdf, 43 KB)
Human Mapping 50K Array Xba 240 and Human Mapping 50K Array Hind 240 (pdf, 71 KB)
Protocol, Long
Safety Data Sheets
Mapping 100K Array Set, Hind Array (zip, 288 KB)
Mapping 100K Array Set, Xba Array (zip, 288 KB)
Sample Data
Mapping 100k HapMap Trio Dataset
Other
Mapping 50K Xba Reference Genotype Calls (zip, 157 KB)
Mapping 50K Xba Reference DNA Concordance (zip, 3.5 MB)
Mapping 50K Hind Reference Genotype Calls (zip, 152 KB)
Mapping 50K Hind Reference DNA Concordance (zip, 3.5 MB)
NetAffx Annotation Files
Mapping50K_Hind240 Annotations, GDAS3, Release 20 (16 MB 06/27/05)
Mapping50K_Xba240 Annotations, GDAS3, Release 20 (17 MB 06/27/05)
Mapping50K_Hind240 Annotations, GTYPE Format, Release 21 (13 MB 01/02/07)
Mapping50K_Xba240 Annotations, GTYPE Format, Release 21 (14 MB 01/02/07)
Mapping50K_Hind240 Annotations, CSV format, Release 30 (12 MB 11/15/09)
Mapping50K_Xba240 Annotations, CSV format, Release 30 (12 MB 11/15/09)
Mapping50K_Xba240 Annotations, SQLite Format, Release 30 (32 MB 11/15/09)
Mapping50K_Hind240 Annotations, SQLite Format, Release 30 (32 MB 11/15/09)
Sequence Files
Mapping50K_Hind240 Flanking Sequences, FASTA (1 MB 08/20/08)
Mapping50K_Hind240 Probe Sequences, Tabular (12 MB 08/20/08)
Mapping50K_Xba240 Flanking Sequences, FASTA (1 MB 08/20/08)
Mapping50K_Xba240 Probe Sequences, Tabular (13 MB 08/20/08)
Archived NetAffx Annotation Files
Mapping50K_Hind240 Annotations, CSV, Release 20 (11 MB 06/15/06)
Mapping50K_Hind240 Annotations, GTYPE, Release 20 (12 MB 03/09/06)
Mapping50K_Xba240 Annotations, CSV, Release 20 (11 MB 06/15/06)
Mapping50K_Xba240 Annotations, GTYPE, Release 20 (12 MB 03/09/06)
Mapping50K_Xba240 Annotations, SQLite Format, Release 29 (28 MB 10/13/09)
Mapping50K_Hind240 Annotations, CSV format, Release 21 (11 MB 01/29/07)
Mapping50K_Xba240 Annotations, CSV format, Release 21 (12 MB 01/29/07)
Mapping50K_Hind240 Annotations, CSV format, Release 22 (12 MB 03/09/07)
Mapping50K_Xba240 Annotations, CSV format, Release 22 (12 MB 03/09/07)
Mapping50K_Hind240 Annotations, CSV format, Release 23 (12 MB 07/12/07)
Mapping50K_Xba240 Annotations, CSV format, Release 23 (13 MB 07/12/07)
Mapping50K_Hind240 Annotations, CSV format, Release 24 (11 MB 11/28/07)
Mapping50K_Xba240 Annotations, CSV format, Release 24 (12 MB 11/28/07)
Mapping50K_Hind240 Annotations, CSV format, Release 25 (13 MB 03/19/08)
Mapping50K_Xba240 Annotations, CSV format, Release 25 (13 MB 03/19/08)
Mapping50K_Hind240 Annotations, CSV format, Release 26 (13 MB 07/09/08)
Mapping50K_Xba240 Annotations, CSV format, Release 26 (13 MB 07/09/08)
Mapping50K_Hind240 Annotations, SQLite Format, Release 29 (28 MB 10/13/09)
Mapping50K_Hind240 Annotations, CSV format, Release 27 (12 MB 11/25/08)
Mapping50K_Xba240 Annotations, CSV format, Release 27 (12 MB 11/25/08)
Mapping50K_Hind240 Annotations, CSV format, Release 28 (12 MB 03/06/09)
Mapping50K_Xba240 Annotations, CSV format, Release 28 (13 MB 03/06/09)
Mapping50K_Xba240 Annotations, SQLite Format, Release 24 (31 MB 10/13/09)
Mapping50K_Hind240 Annotations, SQLite Format, Release 24 (31 MB 10/13/09)
Mapping50K_Hind240 Annotations, SQLite Format, Release 28 (33 MB 10/13/09)
Mapping50K_Xba240 Annotations, SQLite Format, Release 28 (33 MB 10/13/09)
Mapping50K_Hind240 Annotations, SQLite Format, Release 27 (33 MB 10/13/09)
Mapping50K_Xba240 Annotations, SQLite Format, Release 27 (33 MB 10/13/09)
Mapping50K_Hind240 Annotations, SQLite Format, Release 26 (35 MB 10/13/09)
Mapping50K_Xba240 Annotations, SQLite Format, Release 26 (35 MB 10/13/09)
Mapping50K_Hind240 Annotations, SQLite Format, Release 25 (35 MB 10/13/09)
Mapping50K_Xba240 Annotations, SQLite Format, Release 25 (35 MB 10/13/09)
Mapping50K_Hind240 Annotations, CSV format, Release 29 (10 MB 07/08/09)
Mapping50K_Xba240 Annotations, CSV format, Release 29 (11 MB 07/08/09)
Required Products
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