GeneChip Mouse Mapping 5K SNP Kit
The Affymetrix GeneChip Mouse Mapping 5K SNP Kit contains approximately 5,000 SNPs in a single, highly multiplexed assay.
The Affymetrix GeneChip® Mouse Mapping 5K SNP Kit contains approximately 5,000 SNPs in a single, highly multiplexed assay. It allows researchers to perform high-resolution linkage mapping studies on mouse strains, resulting in approximately 1,500 informative markers for every cross of 20 common strains. With the Mouse Mapping 5K SNP Kit, data is generated using proven molecular inversion probe (MIP) technology in combination with GeneChip® Universal Tag Arrays, and scanned on a Scanner 3000 TG System.
Related Publications
Laurie C. C., et al. Linkage Disequilibrium in Wild Mice. PLoS Genet 3(8): 1,487-1,495 (2007).
Additional Materials
For research use only. Not for use in diagnostic procedures.

Assay Panel Files
Mouse Mapping 5K SNP Kit (zip, 97 KB)
Brochures
Data Sheets
Mouse Mapping 5K SNP Kit (pdf, 286 KB)
Library Files
Assay Panel Files - Complete Listing
Manuals
Targeted Genotyping System User's Guide (pdf, 4.04 MB)
Targeted Genotyping Analysis (GTGS) User's Guide, includes TG protocol (pdf, 1.9 MB)
Targeted Genotyping System Site Preparation Guide (pdf, 892 KB)
Protocol, Long
Gene Expression Assay and Data Analysis
Quick Reference Cards
Targeted Genotyping Quick Reference Card, includes TG Protocol (zip, 1.62 MB)
User Bulletin, Affymetrix Targeted Genotyping System (pdf, 69 KB)
Safety Data Sheets
Targeted Genotyping Wash Solution B (pdf, 26 KB)
Targeted Genotyping Wash Solution A (pdf, 26 KB)
Mouse Mapping 5K SNP Kit (pdf, 82 KB)
White Papers
Targeted Genotyping Algorithm Enhancements for Release 1.5 (pdf, 21 KB)
Other
Custom Panel Design Request Form (zip, 12 KB)
Custom Panel Design Guide (zip, 143KB)

Required Products
Related Products
| Targeted Genotyping Services |
| GeneChip Universal Tag Arrays |



