GeneChip Canine Genome 2.0 Array
Learn more about the GeneChip Canine Genome 2.0 Array.
Canis familiaris is an important model organism for biomedical research of human disease conditions. The GeneChip® Canine Genome 2.0 Array enables researchers to simultaneously interrogate 18,000 C. familiaris mRNA/EST-based transcripts and over 20,000 non-redundant predicted genes.
Sequence information for this array includes content from Canis familiaris UniGene Build #11 (April, 2005), GenBank® mRNAs up to April 15, 2005, as well as the BROADD1 gene predictions from the boxer dog genome, downloaded from EBI on May 9, 2005. Purchasers of the array will have access to detailed sequence information via CD library files and through the online NetAffx™ Analysis Center.
Instrument Software Requirements
- GeneChip® Scanner 3000, enabled for High-Resolution Scanning* or GeneChip Scanner 3000 7G
- GeneChip® Operating Software (GCOS) v1.1.1, which contains the High-Resolution Scanning Update, or later
*GeneChip Scanner 3000 High-Resolution Update is standard on all instruments shipped starting in September 2003 with serial number series 502. Previous versions (serial number series 501) will require the 00-0110 GeneChip Scanner 3000 High-Resolution Update to be installed.
For research use only. Not for use in diagnostic procedures.

Comparison Sheets / Array Comparisons
Canine 2.0 to HG-U133 Plus, Good Match (zip, 182 KB)
Canine to Canine 2.0 Best Match
Comparison Spreadsheets User's Guide (pdf, 82 KB)
Canine 2.0 to HG-U133 Plus, Complex Match (zip, 1.4 MB)
Canine 2.0 to HG-U133 Plus, Best Match (zip, 164 KB)
Canine to Canine 2.0 Good Match
Canine 2.0 to HG-U133 Plus, No Match (zip, 32 KB)
Data Sheets
Canine Genome 2.0 Array (pdf, 687 KB)
Library Files
Canine 2.0 Genome Array (zip, 22 MB)
Manuals
HT 3' IVT Express Kit (pdf 5.93 MB)
3' IVT Express Kit User Manual (pdf, 1.6 MB)
Probe Set Data in MAGE-ML Format
Package Inserts
Canine Genome 2.0 Array (pdf, 493 KB)
Protocol, Long
Other
NetAffx Alignment Files
Canine_2 Alignments To Genome, PSL Format (6 MB 11/17/06)
NetAffx Annotation Files
Canine_2 Annotations, CSV format, Release 30 (9 MB 11/15/09)
Canine_2 Annotations, MAGE-ML XML Format, Release 30 (61 MB 11/15/09)
Canine_2 Orthologs/Homologs, CSV Format, Release 30 (10 MB 11/15/09)
Canine_2 BLASTP annotations, CSV Format, Release 30 (3 KB 11/16/09)
Sequence Files
Canine_2 Consensus Sequences, FASTA (18 MB 08/20/08)
Canine_2 Control Sequences, FASTA (67 KB 09/17/05)
Canine_2 Probe Sequences, FASTA (9 MB 08/20/08)
Canine_2 Probe Sequences, Tabular (8 MB 08/20/08)
Canine_2 Target Sequences, FASTA (6 MB 08/20/08)
Archived NetAffx Annotation Files
Canine_2 Orthologs/Homologs, CSV format, Release 21 (8 MB 11/30/06)
Canine_2 BLASTP annotations, CSV format, Release 21 (4 MB 11/15/06)
Canine_2 Annotations, MAGE-ML XML format, Release 21 (62 MB 06/15/07)
Canine_2 Annotations, CSV format, Release 21 (9 MB 05/31/07)
Canine_2 Annotations, MAGE-ML XML Format, Release 25 (55 MB 03/18/08)
Canine_2 Annotations, CSV format, Release 25 (9 MB 03/18/08)
Canine_2 Annotations, MAGE-ML XML, Release 20 (61 MB 06/15/07)
Canine_2 Orthologs/Homologs, CSV Format, Release 25 (9 MB 03/18/08)
Canine_2 Annotations, CSV, Release 20 (9 MB 05/31/07)
Canine_2 Annotations, BLASTP, Release 20 (4 MB 07/14/06)
Canine_2 Annotations, Orthologs, Release 20 (8 MB 08/21/06)
Canine_2 Annotations, CSV format, Release 22 (9 MB 05/31/07)
Canine_2 Annotations, MAGE-ML XML Format, Release 22 (58 MB 06/15/07)
Canine_2 BLASTP annotations, CSV Format, Release 22 (383 KB 03/09/07)
Canine_2 Orthologs/Homologs, CSV Format, Release 22 (9 MB 03/09/07)
Canine_2 Annotations, CSV format, Release 23 (9 MB 07/12/07)
Canine_2 Annotations, MAGE-ML XML Format, Release 23 (56 MB 07/12/07)
Canine_2 BLASTP annotations, CSV Format, Release 23 (384 KB 07/12/07)
Canine_2 Orthologs/Homologs, CSV Format, Release 23 (9 MB 07/12/07)
Canine_2 Annotations, CSV format, Release 24 (9 MB 11/06/07)
Canine_2 Annotations, MAGE-ML XML Format, Release 24 (55 MB 11/06/07)
Canine_2 Orthologs/Homologs, CSV Format, Release 24 (9 MB 11/06/07)
Canine_2 Annotations, CSV format, Release 26 (9 MB 07/08/08)
Canine_2 Annotations, MAGE-ML XML Format, Release 26 (55 MB 07/08/08)
Canine_2 BLASTP annotations, CSV Format, Release 26 (1 KB 07/08/08)
Canine_2 Orthologs/Homologs, CSV Format, Release 26 (9 MB 07/08/08)
Canine_2 Annotations, CSV format, Release 27 (9 MB 11/30/08)
Canine_2 Annotations, MAGE-ML XML Format, Release 27 (57 MB 11/24/08)
Canine_2 BLASTP annotations, CSV Format, Release 27 (467 KB 11/24/08)
Canine_2 Orthologs/Homologs, CSV Format, Release 27 (9 MB 11/24/08)
Canine_2 Annotations, CSV format, Release 28 (8 MB 03/12/09)
Canine_2 Annotations, MAGE-ML XML Format, Release 28 (59 MB 03/12/09)
Canine_2 BLASTP annotations, CSV Format, Release 28 (23 KB 03/04/09)
Canine_2 Orthologs/Homologs, CSV Format, Release 28 (10 MB 03/12/09)
Canine_2 Annotations, CSV format, Release 29 (9 MB 07/01/09)
Canine_2 Annotations, MAGE-ML XML Format, Release 29 (59 MB 07/01/09)
Canine_2 Orthologs/Homologs, CSV Format, Release 29 (10 MB 07/01/09)
Canine_2 BLASTP annotations, CSV Format, Release 29 (3 KB 07/01/09)

Required Products



